Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMALKSLVVLPLLVLVLLLVRVQPSLGKESAAAKFERQHMDSGNSPSSSSNYCNLMMCCRKMTQGKCKPVNTFVHESLADVKAVCSQKKVTCKNGQTNCYQSKSTMRITDCRETGSSKYPNCAYKTTQVEKHIIVACGGKPSVPVHFDASV
3DJO Chain:A ((1-124))--------------------------KESAAAKFERQHMDSGNSPSSSSNYCNLMMCCRKMTQGKCKPVNTFVHESLADVKAVCSQKKVTCKNGQTNCYQSKSTMRITDCRETGSSKYPNCAYKTTQVEKHIIVACGGKPSVPVHFDASV


General information:
TITO was launched using:
RESULT:

Template: 3DJO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24717 for 800 contacts (-30.9/contact) +
2D Compatibility (PS) -13991 + (NN) -12388 + (LL) 3040
1D Compatibility (HY) -14800 + (ID) 6200
Total energy: -69056.0 ( -86.32 by residue)
QMean score : 0.446

(partial model without unconserved sides chains):
PDB file : Tito_3DJO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DJO-query.scw
PDB file : Tito_Scwrl_3DJO.pdb: