Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLGITVLAALLACASSCGVPSFPPNLSARVVGGEDARPHSWPWQISLQYLKNDTWRHTCGGTLIASNFVLTAAHCISNTRTYRVAVGKNNLEVEDEEGSLFVGVDTIHVHKRWNA--LLLRNDIALIKLAEHVELSDTIQVACLPEKDSLLPKDYPCYVTGWGRLWTNGPIADKLQQGLQPVVDHATCSRIDWWGFRVKKTMVCAGGDGVISACNGDSGGPLNCQLENGSWEVFGIVSFGSRRGCNTRKKPVVYTRVSAYIDWINEKMQL
1HV7 Chain:A ((1-237))
-----------------------------VVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVDRELTFRVVVGEHNLN-QNDGTEQYVGVQKIVVHPYWNTDDVAAGYDIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYLPTVDYAICSSSSYWGSTVKNSMVCAGGDGVRSGCQGDSGGPLHC-LVNGQYAVHGVTSFVSRLGCNVTRKPTVFTRVSAYISWINNVI--
General information:
TITO was launched using:
RESULT:
Template:
1HV7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -177609 for 2086 contacts (-85.1/contact) +
2D Compatibility (PS) -25533 + (NN) -9282 + (LL) 2444
1D Compatibility (HY) -22400 + (ID) 6250
Total energy: -238630.0 ( -114.40 by residue)
QMean score : 0.471
(partial model without unconserved sides chains):
PDB file :
Tito_1HV7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HV7-query.scw
PDB file :
Tito_Scwrl_1HV7.pdb
: