Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
IQLIPPLINLLMSIEPDVIYAGHDNTKPDTSSSLLTSLNQLGERQLLSVVKWSKSLPGFRNLHIDDQITLIQYSWMSLMVFGLGWRSYKHVSGQMLYFAPDLILNEQRMKESSFYSLCLTMWQIPQEFVKLQVSQEEFLCMKVLLLLNTIPLEGLRSQTQFEEMRSSYIRELIKAIGLRQKGVVSSSQRFYQLTKLLDNLHDLVKQLHLYCLNTFIQSRALSVEFPEMMSEVIAAQLPKILAGMVKPLLFHKK
3D90 Chain:A ((7-256))
-QLIPPLINLLMSIEPDVIYAGHDN--PDTSSSLLTSLNQLGERQLLSVVKWSKSLPGFRNLHIDDQITLIQYSWMSLMVFGLGWRSYKHVSGQMLYFAPDLILNEQRMKESSFYSLCLTMWQIPQEFVKLQVSQEEFLCMKVLLLLNTIPLEGLRSQTQFEEMRSSYIRELIKAIGLRQ-GVVSSSQRFYQLTKLLDNLHDLVKQLHLYCLNTFIQSRALSVEFPEMMSEVIAAQLPKILAGMVKPLLFH--
General information:
TITO was launched using:
RESULT:
Template:
3D90.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -167249 for 1933 contacts (-86.5/contact) +
2D Compatibility (PS) -25908 + (NN) -9903 + (LL) 512
1D Compatibility (HY) -44000 + (ID) 12350
Total energy: -258898.0 ( -133.94 by residue)
QMean score : 0.820
(partial model without unconserved sides chains):
PDB file :
Tito_3D90.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3D90-query.scw
PDB file :
Tito_Scwrl_3D90.pdb
: