Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVRPLNCIVAVSQNMGIGKNGDLPWPPLRNEFQYFQRMTTVSSVEGKQNLVIMGRKTWFSIPEKNRPLKDRINIVLSRELKEPPKGAHFLAKSLDDALELIEDPELTNKVDVVWIVGGSSVYKEAMNKPGHVRLFVTRIMQEFESDAFFPEIDFEKYKLLPEYPGVPLDVQEEKGIKYKFEVYEKNN
3F8Y Chain:A ((2-187))-VGSLNCIVAVSQNMGIGKNGDLPWPPLRNEFRYFKRMTTTSSVEGKQNLVIMGKKTWFSIPEKNRPLKGRINLVLSRELKEPPQGAHFLSRSLDDALKLTEQPELANKVDMVWIVGGSSVYKEAMNHPGHLKLFVTRIMQDFESDTFFPEIDLEKYKLLPEYPGVLSDVQEEKGIKYKFEVYEKND


General information:
TITO was launched using:
RESULT:

Template: 3F8Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118543 for 1406 contacts (-84.3/contact) +
2D Compatibility (PS) -19984 + (NN) -8715 + (LL) 208
1D Compatibility (HY) -25200 + (ID) 8050
Total energy: -180284.0 ( -128.22 by residue)
QMean score : 0.676

(partial model without unconserved sides chains):
PDB file : Tito_3F8Y.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3F8Y-query.scw
PDB file : Tito_Scwrl_3F8Y.pdb: