Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRMLLALLALSAARPSASAESHWCYEVQAESSNYPCLVPVKWGGNCQKDRQSPINIVTTKAKVDKKLGRFFFSGYD--KKQTWTVQNNGHSVMMLLENKASISGGGLPAPYQAKQLHLHWSD--LPYKGSEHSLDGEHFAMEMHIVHEKEKGTSRNVKEAQDPEDEIAVLAFLVEAGTQVNEGFQPLVEALSNIPKPEMSTTMAESSLLDLLPKEEKLRHYFRYLGSLTTPTCDEKVVWTVFREPIQLHREQILAFSQKLY---YDKEQTVSMKDNVRPLQQLGQRTVIKSGAPGRPLPWALPALLGPMLACLLAGFLR |
1JCZ Chain:A ((21-260)) | --------------------------------------------SCGGLLQSPIDLHSDILQYDASLTPLEFQGYNLSANKQFLLTNNGHSVKLNLPSDMHIQG--LQSRYSATQLHLHWGNPNDPH-GSEHTVSGQHFAAELHIVHYNSD-LYPDASTASNKSEGLAVLAVLIEMGS-FNPSYDKIFSHLQHVKYKGQEAFVPGFNIEELLP--ERTAEYYRYRGSLTTPPCNPTVLWTVFRNPVQISQEQLLALETALYCTHMDDPSPREMINNFRQVQKFDERLVYTS---------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1JCZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -92964 for 1870 contacts (-49.7/contact) +
2D Compatibility (PS) -24779 + (NN) -5331 + (LL) 4720
1D Compatibility (HY) -20400 + (ID) 4400
Total energy: -143154.0 ( -76.55 by residue)
QMean score : 0.318
|
|
|