Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNVPHKSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAALHFNPRLD-TSEVVFNSKEQGSWGREERGPGVPFQRGQPFEVLIIASDDGFKAVVGDAQYHHFRHRLPLARVRLVEVGGDVQLDSVRIF
3I8T Chain:A ((28-162))
--TLPYKRPIPGGLSVGMSVYIQGMAKENMRRFHVNFAVGQDDGADVAFHFNPRFDGWDKVVFNTMQSGQWGKEEKKKSMPFQKGKHFELVFMVMPEHYKVVVNGNSFYEYGHRLPVQMVTHLQVDGDLELQSINFL
General information:
TITO was launched using:
RESULT:
Template:
3I8T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76487 for 1015 contacts (-75.4/contact) +
2D Compatibility (PS) -14230 + (NN) -6245 + (LL) 180
1D Compatibility (HY) -14000 + (ID) 2550
Total energy: -113332.0 ( -111.66 by residue)
QMean score : 0.571
(partial model without unconserved sides chains):
PDB file :
Tito_3I8T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3I8T-query.scw
PDB file :
Tito_Scwrl_3I8T.pdb
: