Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRAAPPPLFLLLLLLLLLVSWASRGEAAPDQDEIQRLPGLAKQPSFRQYSGYLK-GSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEY--KNNKLFLTGESYAGIYIPTLA--VLVMQDPSMNLQGLAVGNGLSSYEQNDNSLVYFAYYHGLLGNRLW--SSLQTHCCSQ-----NKC-----NFYDNKDL-ECV-----TNLQEVARIVGNSGLNIYNLYAPCAGGVPSHFRYEKDTVVVQDLGNIFTRLPLKRMWHQALLRSGDKVRMDPPCTNTTAASTYLNNPYVRKALNIPEQLPQWDMCNFLVNLQYRRLYRSMNSQYLKL--LSSQKYQILLYNGDVDMACNFMGDEWFVDSL----NQKMEVQR-RPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAAFTMFSRFLNKQPY |
| 1WPX Chain:A ((8-416)) | ----------------------------------------LGIDPNVTQYTGYLDVEDEDKHFFFWTFESRNDPAKDPVILWLNGGPGCSSLTGLFFELGPSSIGPDLKPIG-NPYSWNSNATVIFLDQPVNVGFSYSGSSG-VSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGESYAGHYIPVFASEILSHKDRNFNLTSVLIGNGLT------DPLTQYNYYEPMACGEGGEPSVLPSEECSAMEDSLERCLGLIESCYDSQSVWSCVPATIYCNNAQLAP-YQRTGRNVYDIRKDCEGGNLCY-------PTLQDIDD------------------------------------YLNQDYVKEA--VGAEVDHYESCNFDINRNFLFAGDWMKPYHTAVTDLLNQDLPILVYAGDKDFICNWLGNKAWTDVLPWKYDEEFASQKVRNWTASITD---EVAGEVKSYKHFTYLRVFNGGHMVPFDVPENALSMVNEWIH---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1WPX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -189428 for 3348 contacts (-56.6/contact) +
2D Compatibility (PS) -40398 + (NN) -24577 + (LL) 6736
1D Compatibility (HY) -28400 + (ID) 7150
Total energy: -283217.0 ( -84.59 by residue)
QMean score : 0.468
|
|
|