Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIASAFDSREAYDRELIHEIDMYAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPSLLPKYPGLHTHRQALENGDEEHGTSVHFVTDELDGGPVILQAKVPVFAGDSEDDITARVQTQEHAIYPLVISWFADGRLKMHENAAWLDGQRLPPQGYAADE
4DS3 Chain:A ((9-204))
-RVVIFISGGGSNMEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAAGIATQVFKRKDFASKEAHEDAILAALDVLKPDIICLAGYMRLLSGRFIAPYEGRILNIHPSLLPLFPGLHTHQRALDAGMKLAGCTVHLVTE--DEGPILAQAAVPVLDGDTAETLAARVLKAEHRLYPLALQKFAAG-------------------------
General information:
TITO was launched using:
RESULT:
Template:
4DS3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -130286 for 1467 contacts (-88.8/contact) +
2D Compatibility (PS) -21108 + (NN) -13583 + (LL) 1948
1D Compatibility (HY) -19200 + (ID) 4350
Total energy: -186579.0 ( -127.18 by residue)
QMean score : 0.700
(partial model without unconserved sides chains):
PDB file :
Tito_4DS3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4DS3-query.scw
PDB file :
Tito_Scwrl_4DS3.pdb
: