Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDAVSSDRNFPNSTNLPRNPSMADYEARIFTFGTWIYSVNKEQLARAGFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLEQKGQEYINNIHLTHSLEECLVRTT
3G76 Chain:A ((12-108))
------------NSTNLPRNPSMADYEARIFTFGTWIYSVNKEQLARAGFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLEQKGQEYINNIHLTHSL--------
General information:
TITO was launched using:
RESULT:
Template:
3G76.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25541 for 676 contacts (-37.8/contact) +
2D Compatibility (PS) -10457 + (NN) -4376 + (LL) 1156
1D Compatibility (HY) -12800 + (ID) 4850
Total energy: -56868.0 ( -84.12 by residue)
QMean score : 0.416
(partial model without unconserved sides chains):
PDB file :
Tito_3G76.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3G76-query.scw
PDB file :
Tito_Scwrl_3G76.pdb
: