Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKLSVFFIFLFCSIATAAESLPDLKIEKLDEGVYVHTSFEEVNGWGVVPKHGLVVLVNAEAYLIDTPFTAKDTEKLVTWFVERGYKIKGSISSHFHSDSTGGIEWLNSRSIPTYASELTNELLKKDGKVQATNSFSGVNYWLVKNKIEVFYPGPGHTPDNVVVWLPERKILFGGCFIKPYGLGNLGDANIEAWPKSAKLLKSKYGKAKLVVPSHSEVGDASLLKLTLEQAVKGLNESKKPSKPSN
1DDK Chain:A ((1-220))
-------------------ESLPDLKIEKLDEGVYVHTSFEEVNGWGVVPKHGLVVLVNAEAYLIDTPFTAKDTEKLVTWFVERGYKIKGSISSHFHSDSTGGIEWLNSRSIPTYASELTNELLKKDGKVQATNSFSGVNYWLVKNKIEVFYPGPGHTPDNVVVWLPERKILFGGCFIKPYGLGNLGDANIEAWPKSAKLLKSKYGKAKLVVPSHSEVGDASLLKLTLEQAVKGLNESK-------
General information:
TITO was launched using:
RESULT:
Template:
1DDK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94673 for 1926 contacts (-49.2/contact) +
2D Compatibility (PS) -24392 + (NN) -14843 + (LL) 1920
1D Compatibility (HY) -31200 + (ID) 11000
Total energy: -174188.0 ( -90.44 by residue)
QMean score : 0.655
(partial model without unconserved sides chains):
PDB file :
Tito_1DDK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DDK-query.scw
PDB file :
Tito_Scwrl_1DDK.pdb
: