Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTMKDIIRDGHPTLRQKAAELELPLTKEEKETLIAMREFLVNSQDEEIAKRYGLRSGVGLAAPQINISKRMIAVLIPDDGSGKSYDYMLVNPKIVSHSVQEAYLPTGEGCLSVDDNVAGLVHRHNRITIKAKDIEGNDIQLRLKGYPAIVFQHEIDHLNGVMFYDHIDKNHPLQPHTDAVEV
2OS1 Chain:A ((1-178))
MITMKDIIREGNPTLRAVAEEVPVPITEEDRQLGEDMLTFLKNSQDPVKAEELQLRGGVGLAAPQLDISKRIIAVHVP------SLSTVMYNPKILSHSVQDVCLGEGEGCLSVDRDVPGYVVRHNKITVSYFDMAGEKHKVRLKNYEAIVVQHEIDHINGIMFYDHINKENPFA--------
General information:
TITO was launched using:
RESULT:
Template:
2OS1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87175 for 1333 contacts (-65.4/contact) +
2D Compatibility (PS) -17660 + (NN) -4704 + (LL) 52
1D Compatibility (HY) -18800 + (ID) 4800
Total energy: -133087.0 ( -99.84 by residue)
QMean score : 0.717
(partial model without unconserved sides chains):
PDB file :
Tito_2OS1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OS1-query.scw
PDB file :
Tito_Scwrl_2OS1.pdb
: