Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLPTAQEVQGLMARYIELVDVGDIEAIVQMYADDATVEDPFGQPPIHGREQIAAFYRQGLGGGKVRACLTGPVRASHNGCGAMPFRVEMVWNGQPCALDVIDVMRFDEHGRIQTMQAYWSEVNLSVREPQ
2INX Chain:A ((2-127))
-NLPTAQEVQGLMARYIELVDVGDIEAIVQMYADDATVENPFGQPPIHGREQIAAFYRQGL---KVRACLTGPVRASHNGCGAMPFRVEMVWNGQPCALDVIDVMRFDEHGRIQTMQAYWSEVNLSV----
General information:
TITO was launched using:
RESULT:
Template:
2INX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82803 for 903 contacts (-91.7/contact) +
2D Compatibility (PS) -13712 + (NN) -4845 + (LL) -124
1D Compatibility (HY) -18400 + (ID) 6100
Total energy: -125984.0 ( -139.52 by residue)
QMean score : 0.459
(partial model without unconserved sides chains):
PDB file :
Tito_2INX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2INX-query.scw
PDB file :
Tito_Scwrl_2INX.pdb
: