Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MELAVGNLSEGNASWPEPPAPEPGPLFGIGVENFVTLVVFGLIFALGVLGNSLVITVLARSKPGKPRSTTNLFILNLSIADLAYLLFCIPFQATVYALPTWVLGAFICKFIHYFFTVSMLVSIFTLAAMSVDRYVAIVHSRRSSSLRVSRNALLGVGCIWALSIAMAS--PVAYHQGLFHPRASNQTFCWEQWP---DPRHKKAYVVCTFVFGYLLPLLLICFCYAKVLNHLHKKLKNMSKKSEASKKKTAQTVL-----------VVVVVFGISWLPHHIIHLWAEFGVFPLTPASFLFRITAHCLAYSNSSVNPIIYAFLSENFRKAYKQVFKCHIRKDSHLSDTKESKSRIDTPPSTNCTHV |
| 2Y01 Chain:A ((16-300)) | -------------------------------------LLMALVVLLIVAGNVLVIAAIGSTQ--RLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAIS-ALVSFLPIMMHW--WRDEDPQALKCYQD-PGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQ---------------SRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNR-DLVP-DWLF-VAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLA------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2Y01.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -217600 for 1868 contacts (-116.5/contact) +
2D Compatibility (PS) -26135 + (NN) -9966 + (LL) 3580
1D Compatibility (HY) -32000 + (ID) 4150
Total energy: -286271.0 ( -153.25 by residue)
QMean score : 0.249
|
|
|