Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPFPNCSAPSTVVATAVGVLLGLECGLGLLGNAVALWTFLFRVRVWKPYAVYLLNLALADLLLAACLPFLAAFYLSLQAWHLGRVGCWALHFLLDLSRSVGMAFLAAVALDRYLRVVHPRLKVNLLSPQAALGVSGLVWLLMVALTCPGLL--ISEAAQNSTRCHSFYSRADGSFSIIWQEALSCLQFVLPFGLIVFCNAGIIRALQKRLR---EPEKQPKLQRAQALVTLVVVLFALCFLPCFLARVLMHIFQNLGSCRALCAVAHTSDVTGSLTYLHSVLNPVVYCFSSPTFRSSYRRVFHTLRGKGQAAEPPDFNPRDSYS
4RWD Chain:A ((115-405))------SASSLALAIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYL-METWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRPRDGAVVCMLQFPSPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSVRLLSGSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDRRDPLVVAALH---LCIALGYANSSLNPVLYAFLDENFKRCFRQLC----------------------


General information:
TITO was launched using:
RESULT:

Template: 4RWD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -255255 for 2174 contacts (-117.4/contact) +
2D Compatibility (PS) -29411 + (NN) -11435 + (LL) 336
1D Compatibility (HY) -26000 + (ID) 3600
Total energy: -325365.0 ( -149.66 by residue)
QMean score : 0.329

(partial model without unconserved sides chains):
PDB file : Tito_4RWD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RWD-query.scw
PDB file : Tito_Scwrl_4RWD.pdb: