Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNGTYNTCGSSDLTWPPAIKLGFYAYLGVLLVLGLLLNSLALWVFCCRMQQWTETRIYMTNLAVADLCLLCTLPF-VLHSLRDT--SDTPLCQLSQGIYLTNRYMSISLVTAIAVDRYVAVRHPLRARGLRSPRQAAAVCAVLWVL-------VIGSLVARWLLGIQEGGFCFRSTR---HNFNSMAFPLLGFYLPLAVVVFC------SLKVVTALAQRPPTDVGQAEATRKAARMVWANLLVFVVCFLPLHVGLTVRLAVGWNACALLETIRRAL--YITSKLSDANCCLDAICYYYMAKEFQEASALAVAPSAKAHKSQDSLCVTLA |
5C1M Chain:A ((22-294)) | ------------------------ALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATSTLPFQSVNYLMGTWPFGNILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILSSAIGLPVMFMATTKYRQGSIDCTLTFSHPTWYWENLLKICVFIFAFIMPVLIITVCYGLMILRLKSVRMLSGSKEKD----RNLRRITRMVLVVVAVFIVCWTPIHIYVIIKALI-----TIPETTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRCF---------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 5C1M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -198699 for 1767 contacts (-112.4/contact) +
2D Compatibility (PS) -25457 + (NN) -8072 + (LL) 2628
1D Compatibility (HY) -25200 + (ID) 3700
Total energy: -258500.0 ( -146.29 by residue)
QMean score : 0.222
|
|
|