Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDTGPDQSYFSGNHWFVFSVYLLTFLVGLPLNLLALVVFVGKLRCRPVAVDVLLLNLTASDLLLLLFLPFRMVEAANGMHWPLPFILCPLSGFIFFTTIYLTALFLAAVSIERFLSVAHPLWYKTRPRLGQAGLVSVACWLLASAHCSVVYVIEFSGDISHSQGTNGTCYLEFWKDQLAILLPVRLEMAVVL--FVVPLIITSYCYSRLVWILGRGGSHRRQRRVAGLVAATLLNFLVCFGPYNVS------HVVGYICGESPVWR------IYVTLLSTLNSCVDPFVYYFSSSGFQADFHELLRRLCGLWGQWQQESSMELKEQKGGEEQRADRPAERKTSEHSQGCGTGGQVACAEN |
4XT3 Chain:A ((47-314)) | -------------------LYGVVFLFGSIGNFLVIFTITWRRRIQ-CSGDVYFINLAAADLLFVCTLPLWMQYLLD--H---ASVPCTLLTACFYVAMFASLCFITEIALDRYYAI---VYMRYRP-VKQACLFSIFWWIFA-----VIIAIPHFMVVTKKDNQCMTDY-----DYLEVSYPIILNVELMLGAFVIPLSVISYCYYRISRIVAVSQSRHKGRIVRVLIAVVLV-FIIFWLPYHLTLFVDTLKLLKWISSSCEFERSLKRALILTESLAFCHCCLNPLLYVFVGTKFRQELHCLLAE----------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XT3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -233651 for 1834 contacts (-127.4/contact) +
2D Compatibility (PS) -25803 + (NN) -10367 + (LL) 4124
1D Compatibility (HY) -34800 + (ID) 3600
Total energy: -304097.0 ( -165.81 by residue)
QMean score : 0.235
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