Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNASAASLNDSQVVVVAAEGAAAAATAAGGPDTGEWGPPAAAALGAGGGANGSLELSSQLSAGPPGLLLPAVNPWDVLLCVSGTVIAGENALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILHFVFQYLVPSETVSLLTVGFL----VASFAASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPV-LGW---------NCLAERAACSVVRPLARSHVALLSAAFFMVFGIMLHLYVRICQVVWRHAHQIALQQHCLAPPHLAATRKGVGTLAVVLGTFGASWLPFAIYCVVGSHEDPAVYTYATLL---PATYNSMINPIIYAFRNQEIQRALWLLLCGCFQSKVPFRSRSPSEV |
| 4GBR Chain:A ((23-285)) | -----------------------------------------------------------------------------------------NVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEETCCDFFTNQAYA-IASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKI--DKFCLKE------HKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLCL---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GBR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -201951 for 1773 contacts (-113.9/contact) +
2D Compatibility (PS) -25461 + (NN) -10645 + (LL) 5104
1D Compatibility (HY) -23600 + (ID) 3850
Total energy: -260403.0 ( -146.87 by residue)
QMean score : 0.191
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