Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAAISTSIPVISQPQFTAMNEPQCFYNESIAFFYNRSGKHLATEWNTVSKLVMGLGITVCIFIMLANLLVMVAIYVNRRFHFPIYYLMANLAAADFFAGLAY--FYLMFNTGPNTRRLTVSTWLLRQGLIDTSLTASVANLLAIAIERHITV-FRMQLHTRMSNRRVVVVIVVIWTMAIVMGAIPSVGWNCICDIENCSN------MAPLYSD----SYLVFWAIFN--LVTFVVMVVLYAHIFGYVRQRTMRMSRHSSGPRRNRDTMMSLL---KTVVIVLGAFIICWTPGLVLLLLDVCCPQCDVLAYEKFFL--LLAEFNSAMNPIIYSYRDKEMSATFRQILCCQRSENPTGPTEGSDRSASSLNHTILAGVHSNDHSVV |
| 3REY Chain:A ((7-303)) | -------------------------------------------------SVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVGVLAIPFAITISTGFCA---ACHGCLFIACFVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIAICWVLSFAIGLTPMLGWNNCGQP-----GCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFAAARRQLKQMESQPLPGERARSTLQKEVHAAKSAAIIAGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLAHTNSVVNPFIYAYRIREFRQTFRKIIRS------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3REY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -254530 for 1975 contacts (-128.9/contact) +
2D Compatibility (PS) -27692 + (NN) -14702 + (LL) 4372
1D Compatibility (HY) -30800 + (ID) 3850
Total energy: -327202.0 ( -165.67 by residue)
QMean score : 0.307
|
|
|