Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSENGSFANCCEAGGWAVRPGWSGAGSARPSRTPRPPWVAPALSAVLIVTTAVDVVGNLLVILSVLRNRKLRNAGNLFLVSLALADLVVAFYPYPLILVAIFYDGWALGEEHCKASAFVMGLSVIGSVFNITAIAINRYCYICHSMAYHRIYRRWHTPLHICLIWLLT-VVALLPNFFVGSLEYDPRIYS-------CTFIQTASTQYTAAVVVIHFLLPIAVVSFCYLRIWVLVLQARRKAKPESRLCLKPSDLRSFLTMFVVFVIFAICWAPLNCIGLAVAINPQEMAPQIPEGLFVTSYLLAYFNSCLNAIVYGLLNQNFRREYKRILLALWNPRHCIQDASKGSHAEGLQSPAPPIIGVQHQADAL |
| 2VT4 Chain:A ((13-297)) | -----------------------------------------GMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPGCCDFVTNRA--YAIASSIISFYIPLLIMIFVALRVYREAKEQIR-------------EHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRD----LVPDWLFVAFNWLGYANSAMNPIIY-CRSPDFRKAFKRLLA-------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2VT4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -266621 for 1957 contacts (-136.2/contact) +
2D Compatibility (PS) -26528 + (NN) -4025 + (LL) 3480
1D Compatibility (HY) -26400 + (ID) 3750
Total energy: -323844.0 ( -165.48 by residue)
QMean score : 0.299
|
|
|