Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTPLCLNCSVLPGDLYPGGARNPMACNGSAARGHFDPEDLNLTDEALRLKYLGP------QQTELFMPICATYLLIFVVGAVGNGLTCLVILRHKAMRTPTNYYLFSLAVSDLLVLLVGLPLE----LYEMWHNYPFLLGVGGCYFRTLLFEMVCLASVLNVTALSVERYVAVVHPLQARSMVTRAHVRRVLGAVWGLAMLCSLPNTSLHGIRQLHVPCRGPVPDSAVCMLV--RPRALYNMVVQTTALLF-FCLPMAIMSVLYLLIGLRLRRERLLLMQEAKGRGSAAARSRYTCRLQQHDRGRRQVTKMLFVLVVVFGICWAPFHADRVMWSVVS-QWTDGLHLAFQHVHVISGIFFYLGSAANPVLYSLMSSRFRETFQEALCLGACCHRLRPRHSSHSLSRMTTGSTLCDVGSLGSWVHPLAGNDGPEAQQETDPS |
| 4N6H Chain:A ((83-413)) | -----------------------LANEGKVKEAQAAAEQLKTTRNAYIQKYLGSPGARSASSLALAIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATST-LPFQSAKYLMETW---PFGELLCKAVLSIDYYNM--FTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMVMAVTR--------PRDGAVVCMLQFPSPSWYWDTVTKICVFLFAFVVPILIITVCY-------GLMLLRLRSVRLLSGS-----------KEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDRRDPLVVAALHLCIALG---YANSSLNPVLYAFLDENFKRCFRQ-LCRKPCG------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4N6H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -226408 for 2283 contacts (-99.2/contact) +
2D Compatibility (PS) -32881 + (NN) -10254 + (LL) 4636
1D Compatibility (HY) -28400 + (ID) 5350
Total energy: -298657.0 ( -130.82 by residue)
QMean score : 0.245
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