Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMCPLTLQVTGLMNVSEPNSSFAFVNEFILQGFTCEWTIQIFLFSLFTTTYALTITGNGAIAFVLWCDWRLHTPMYMFLGNFSFLEIWYVSSTVPKMLVNFLSEKKNISFA--------GCFLQFYFFFSLGTSECLLLTVMAFDQYLAICRPLLYPNIMTGHLCAKLVILCWVCGFLWFLIPIVLISQMPFCGPNIIDHVVCDPGPRFAL--DCVSAPRIQLF----CYTLSSLVIFGNFLFIIGSYTLVLKAVLGMPSSTGRHKAFSTCGSH----LAVV----SLCYSSLMVM----YVSPGLGHSTGMQKIETLFYAMVTPLFNPLIYSLQNKEIKAALRKVLGSSNII
2YDV Chain:A ((19-305))---------------------------------------------------LAILGNVLVCWAVWLNSNLQNVTNYFV----------VSAAAADILVGVLAIPFAIAISTGFCAACHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKAHSQGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLKQMESQ--------STLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLR


General information:
TITO was launched using:
RESULT:

Template: 2YDV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -202440 for 1819 contacts (-111.3/contact) +
2D Compatibility (PS) -25705 + (NN) -7699 + (LL) 4900
1D Compatibility (HY) -26000 + (ID) 3200
Total energy: -260144.0 ( -143.01 by residue)
QMean score : 0.204

(partial model without unconserved sides chains):
PDB file : Tito_2YDV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YDV-query.scw
PDB file : Tito_Scwrl_2YDV.pdb: