Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSVLNNSEVKLFLLIGIPGLEHAHIWFSIPICLMYLLAIMGNCTILFIIKTEPSLHEPMYYFLAMLAVSDMGLSLSSLPTMLRVFLFNAMGISPNACFAQEFFIHGFTVMES-------SVLLIMSLDRFLAIHNPLRYSSILTSNRVAKMGL--ILAIRSILLVIPFPFTLRRLKYCQKNLLSHSYCLHQDTMKLACSDNKTNVIYG-------FFIALCTMLDLALIVLSYVLILKTILSIASLAERL------KALNTCVSHICAVLTF-YVPIITLAAMHHFAKHKSPLVVILIADMFLLVPPLMNPIVYCVKTRQIWEKILGKLLNVCGR |
2YCY Chain:A ((15-284)) | ---------------------------SLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVP-------FGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRAR-AKVIICTVWAISALVSFLPI------MMHWWRDEDPQALKCYQDP---GCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIR--DRASKRKRVMLMREHKALKT-LGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYCRSPDFRKAFKRLLAF----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2YCY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -187088 for 1664 contacts (-112.4/contact) +
2D Compatibility (PS) -25236 + (NN) -13307 + (LL) 5368
1D Compatibility (HY) -26800 + (ID) 3400
Total energy: -250463.0 ( -150.52 by residue)
QMean score : 0.196
|
|
|