Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGMSNLTRLSEFILLGLSSRSEDQRPLFALFLIIYLVTLMGNLLIILAIHSDPRLQNPMYFFLSILSFADICYTTVIVPKMLVNFLSEKKTISYAECLAQMYFFL----VFGNIDSYLLAAMAINRCVAICNPFHYVTVMNRRCCVLLLAFPITFSYFHSLLHVLLVNRLTFCTSNVIHHFFCDVNP-VLKL----SCSSTFVNEIVAMTEGLASVMAPFVCIIISYLRILIA----VLKIPSAAGK--------HKAFSTCSSHLTVVIL-----FYGSISYVYLQPLSSYTVKDRIATINYTVLTSVLNPFIYSLRNKDMKRGLQKLINKIKSQMSRFSTKTNKICGP |
| 2YCX Chain:A ((17-294)) | -----------------------------LMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVP--FGATLVVRGTWLWGSFLCELWTSLDVLCVTASIET--LCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMM-------------HWWRDEDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASKRKRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYA--NSAMNPIIYC-RSPDFRKAFK----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YCX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -205243 for 1757 contacts (-116.8/contact) +
2D Compatibility (PS) -25728 + (NN) -7863 + (LL) 5352
1D Compatibility (HY) -28000 + (ID) 3600
Total energy: -265082.0 ( -150.87 by residue)
QMean score : 0.230
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