Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEPRNQTSASQFILLGLSEKPEQETLLFSLFFCMYLVMVVGNLLIILAISIDSHLHTPMYFFLANLSLVDFCLATNTIPKMLVSLQTGSKAISYPCCLIQMYFFHFFGIVDSVIIAMM--AYDRFVAICHPLHYAKIMSLRLCRLLVGALWAFSCFISLTHILLMARL---VFCGSHEVPHYFCDLTPILRLSCTDTSVNRIFILIVAGMVIATPFVCILASYARILVAIMK-------VPSAGGR-----KKAFSTCSSHLSVVALF-------YGTTIGVYLCPSSVLTTVKEKASAVMYTAVTPMLNPFIYSLRNRDLKGALRKLVNRKITSSS |
3VG9 Chain:A ((21-307)) | --------------------------------------ILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIP-FAITISTGFCAACHGCLFIACFVLV---LTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQSQGCGEGQVACLFEDVVPMNYM---------VYFNFFACVLV--PLLLMLGVYLRIFLAARRQLKQMESQPLPGERARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLR-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VG9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -279630 for 1849 contacts (-151.2/contact) +
2D Compatibility (PS) -26146 + (NN) -5684 + (LL) 4088
1D Compatibility (HY) -27600 + (ID) 3250
Total energy: -338222.0 ( -182.92 by residue)
QMean score : 0.252
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