Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEIDNQTWVREFILLGLSSDWCTQISLFSLFLVTYLMTVLGNCLIVLLIRLDSRLHTPMYFFLTNLSLVDVSYATSVVPQLLAHFLAEHKAIPFQSCAAQLFFSLAL----GGIEFVLLAVMAYDRHVAVSDRLRYSAIMHGGLCARLAITSWVSGSINSLVQTAITFQLPMCTNKFIDHISCELLAVVRLACVDTSSNEAAIMVSSIVLLMTPFCLVLLSYIRII----STILKIQSREGRK---------KAFHTCASHLTVVALCYGTTIFTYIQPHSGPSVLQEKLISVF--YAIVMPLLNPVIYSLRNKEVKGAWHKLLEKFSGLTSKLGT |
2Y01 Chain:A ((6-299)) | ----------------LSQQWEAGMSLLMALVV--LLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVP--FGATLVVRGTWLWGSFLCELWTSLDVLCVTASIE--TLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVW---AISALVSF-----LPIMMHWWRDEDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQ-----------SRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLA----------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2Y01.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -210981 for 1898 contacts (-111.2/contact) +
2D Compatibility (PS) -26965 + (NN) -10318 + (LL) 4488
1D Compatibility (HY) -28400 + (ID) 3650
Total energy: -275826.0 ( -145.32 by residue)
QMean score : 0.226
|
|
|