Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLLTDRNTSGTTFTLLGFSDYPELQVPLFLVFLAIYNVTVLGNIGLIVIIKINPKLHTPMYFFLSQLSFVDFCYSSIIAPKMLVNLVVKDR-TISFLGCVVQFFFFCTFVVTESFL--LAVMAYDRFVAICNPLLYTVNMSQKLCVLLVVGSYAWGVSCSLELTCSALKLCFHGFNTINHFFCEFSSLLSLSCSDTYINQWLLFFLATFNEISTLLIVLTSYAFIVVTILKMRSVSGRRKAFSTCASHLTAITIFHGTILFLYCVPNSKNSRHTVKVASVFYTVVIPMLNPLIYSLRNKDVKDTVTEILDTKVFSY |
| 4U14 Chain:A ((21-140)) | -------------------------------FLAL--VTIIGNILVIVAFKVNKQLKTVNNYFLLSLACADLII-GVISMNLFTTYIIMNRWALGNLAC--DLWLSIDYVASNASVMNLLVISFDRYFSITRPLTYRAKRTTKRAGVMI--GLAWVISFVLWAPAILFWQYFVGKRTVPPGECFIQFLSEPTITFGTAIAAFYMPVTIMTILYWRIYKETEKMNCFEMLRIDEGLRLKIYKDCEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U14.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93249 for 709 contacts (-131.5/contact) +
2D Compatibility (PS) -11774 + (NN) -2010 + (LL) 2372
1D Compatibility (HY) -14800 + (ID) 1750
Total energy: -121211.0 ( -170.96 by residue)
QMean score : 0.240
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