Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMEDKNQTVVTEFLLLGLTDHPYQKIVLFFMFLFVYLITLG---GNLGMITLIWIDPRLHTPMYFFLRHLSFVDICSSSSVVPKMLCNIFAEKKDITFLGCAAQMW--FFGLFEAAECFLLAAMAYDRYVAICKPLLYTLIMSQQVCMQLVVGPYAMALISTMTHTIFTFCLPFCGSNIINHFFCDIFPLLSLACADTWVNKFVLFVLAGAIGVLSGLIIMVSYICILMTILKIQTADGKQKAFFTCFSHLAAVSILYGTLFLIYVRPSSSSSLGIYKVISLFYTVVIPMVNPLIYSLRNKEVKDAFRRKIERKKFIIGR
4LDL Chain:A ((158-297))--NRAKRVITTFRTGTWDAYAADEVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILT--KTWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKFALKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIYCRSPDFRIAFQELLCL------------


General information:
TITO was launched using:
RESULT:

Template: 4LDL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -83841 for 765 contacts (-109.6/contact) +
2D Compatibility (PS) -13739 + (NN) -5904 + (LL) 1748
1D Compatibility (HY) -10800 + (ID) 1850
Total energy: -114386.0 ( -149.52 by residue)
QMean score : 0.125

(partial model without unconserved sides chains):
PDB file : Tito_4LDL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4LDL-query.scw
PDB file : Tito_Scwrl_4LDL.pdb: