Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQALNITPEQFSRLLRDHNLTREQFIALYRLRPLVYTPELPGRAKLALVLTGVLIF----ALALFGNALVFYVVTRSKAMRTVTNIFICSLALSDLLITFFCIPVTMLQNISDNWLGGAFICKMVPFVQSTAVVTEILTMTCIAVERHQGLVHPFKMKWQYTNRRAFTMLGVVWLVAVIVGSPMWHVQQLEIKYDFLYEKEHICCLEEWTSPVHQKIYTTFILVIL--FLLPLMVMLILYSKIGYELWIKKRVGDGSVLRTIHGKEMSKIARKKKRAVIMMVTVVALFAVCWAPFHVVHMMIEYSNFEKEYDDVTIKMIFAIVQIIGFSNSICNPIVYAFMNENFKKNVLSAVCYCIVNKTFSPAQRHGNSGITMMRKKAKFSLRENPVEETKGEAFSDGNIEVKLCEQTEEKKKLKRHLALFRSELAENSPLDSGH |
| 4N6H Chain:A ((102-403)) | --------------------TRNAYIQKY-----LGSPGARSASSLALAIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALAT-STLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPI-MVMAVTRPRD-----GAVVCMLQFPSPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRL--------RSVRLLSGSKEKDRSLRRITR---MVLVVVGAFVVCWAPIHI--FVIVWTLVDIDRRDPLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLCRKPCG------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4N6H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -224959 for 2189 contacts (-102.8/contact) +
2D Compatibility (PS) -30292 + (NN) -7934 + (LL) 9756
1D Compatibility (HY) -26400 + (ID) 4600
Total energy: -284429.0 ( -129.94 by residue)
QMean score : 0.293
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