Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MWPNGSSLGPCFRPTNITLEERRLIASPWFAASFCVVGLASNLLALSVLAGARQGGSHTRSSFLTFLCGLVLTDFLGLLVTGTIVVSQHAALFEWHAVDP-GCRLCRFMGVVMIFFGLSPLLLGAAMASERYLGITRPFSRPAVASQRRAWATVGLVWAAALALGLLPLLGVGRYTVQYPGSWC-----FLTLGAESGDVAFGLLFSMLGGLSVGLSFLLNTVSVATLCH---VYHGQEAAQQRPRDSEVEM----MAQLLGIMVVAS-VCWLP-----LLVFIAQTVLRNPPAMSPAGQLSRTTEKELLIYLRVATWNQILDPWVYILFRRAVLRRLQPRLSTRPRSLSLQPQLTQRSGLQ |
4BEY Chain:A ((52-312)) | -----------------------------------MLGFPINFLTLYVTVQHKK----LRTPLNYILLNLAVADLF--MVFGDFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVV---LAIERYVVVCKPMSNFRFG-ENHAIMGVAFTWVMALACAAPPLVGWSRYIPE--GMQCSCGIDYYTPHEETNNESFVIYMFV-------VHFIIPLI-VIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSCFGPIFMTIPAFFAKTS--------------AVYNPVIYIMMNKQFRNCMVTTLCCGKN--------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4BEY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -188679 for 1735 contacts (-108.7/contact) +
2D Compatibility (PS) -24395 + (NN) -1844 + (LL) 4648
1D Compatibility (HY) -3600 + (ID) 850
Total energy: -214720.0 ( -123.76 by residue)
QMean score : 0.123
|
|
|