Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----------------------------------GTSDLCGLAETAFGECTAYVAGGEPAVSRRCCRALGDIRDLAAT------------AAERRAVCACILSEMLAAGDGRVDSGRAAGLPAACNVRVGFIPTSPNFNCFRVR
1F2U Chain:B ((4-148))
ALAREAALSKIGELASEIFAEFTEGKYSEVVVRAEENKVRLFVVWEGKERPLTFLSGGERIALGLAFRLAMSLYLAGEISLLILDEPTPYLDEERRRKLITIMERYLKKIPQVILVSHDEELKDAADHVIRISLENGSSKVEVVS
General information:
TITO was launched using:
RESULT:
Template:
1F2U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15995 for 497 contacts (-32.2/contact) +
2D Compatibility (PS) -10054 + (NN) -1141 + (LL) 0
1D Compatibility (HY) -1200 + (ID) 600
Total energy: -28990.0 ( -58.33 by residue)
QMean score : 0.226
(partial model without unconserved sides chains):
PDB file :
Tito_1F2U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1F2U-query.scw
PDB file :
Tito_Scwrl_1F2U.pdb
: