Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AITC----GTVASSLSPCLGYLSK--------GGVVPPPCCAGVKK---------LNGMAQTTPDRQQA---CRCLQSAAKGVNPSLASGLPGKCGVSIPYPIS--TSTNCATIK-----
1HSS Chain:A ((5-124))
--MCYPGQAFQVPALPACRPLLRLQCNGSQVP-EAVLRDCCQQLAHISEWCRCGALYSMLDS--MYKEHGAFPRCRREVVKLTAASITA----VCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30670 for 484 contacts (-63.4/contact) +
2D Compatibility (PS) -7771 + (NN) 4504 + (LL) -220
1D Compatibility (HY) -4800 + (ID) 850
Total energy: -39807.0 ( -82.25 by residue)
QMean score : 0.143
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: