Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QCNAGNLAVCASPIVSGTPPSKTCCNNLKS-----------QRGCFCQFAHNRAYSSY--INSPNARKTLVSCGVPVPKC
2ALG Chain:A ((9-79))
----SSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQLS-ASVPGVNPNNAAALPGKCGVSIP--
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16285 for 342 contacts (-47.6/contact) +
2D Compatibility (PS) -5950 + (NN) -2317 + (LL) 704
1D Compatibility (HY) -3200 + (ID) 900
Total energy: -27948.0 ( -81.72 by residue)
QMean score : 0.145
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: