Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QCNAGSLAVCASPIISGAKPSTTCCNNLKS-----------QRGCFCQYARNPAYSSY--INSPNARKTLTSCGVAVPKC
2ALG Chain:A ((9-79))
----SSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQLS-ASVPGVNPNNAAALPGKCGVSIP--
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17358 for 342 contacts (-50.8/contact) +
2D Compatibility (PS) -5736 + (NN) 913 + (LL) 664
1D Compatibility (HY) -3600 + (ID) 950
Total energy: -26067.0 ( -76.22 by residue)
QMean score : 0.138
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: