Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----LRVLSEDKKVACIVTD---------LQVCLSALETPIPPSAECCKNLKIQKSCLCDYMENPS--IEKYLEPARKVFAACGMPYPRC----------
2LSE Chain:A ((1-101))
MQEERKKLLEKLEKILDEVTDGAPDEARERIEKLAKDVKDELEEGDAKNMIEKFRDEMEQMYKDAPNAVMEQLLEEIEKLLKKAGSLVPRGSYLEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2LSE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26097 for 482 contacts (-54.1/contact) +
2D Compatibility (PS) -8287 + (NN) -9669 + (LL) 0
1D Compatibility (HY) -1200 + (ID) 750
Total energy: -46003.0 ( -95.44 by residue)
QMean score : 0.433
(partial model without unconserved sides chains):
PDB file :
Tito_2LSE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LSE-query.scw
PDB file :
Tito_Scwrl_2LSE.pdb
: