Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DEMMGRCMHEIANCLVAIDKGTKLPSYCCGRMVK-----------PQPCACKY-----F-IKNPVLLPRLLIACRVPHPKC
1T12 Chain:A ((8-78))
-------TSNLAPCLAYLRNTG-PLGRCCGGVKALVNSARTTEDRQIACTCLKSAAGAISGINLGKAAGLPSTCGVNIP--
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35129 for 316 contacts (-111.2/contact) +
2D Compatibility (PS) -5233 + (NN) -434 + (LL) 612
1D Compatibility (HY) -400 + (ID) 650
Total energy: -41234.0 ( -130.49 by residue)
QMean score : 0.175
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: