Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QPPLGTCGAQLSQLAPCARYSVPPLPGQALPAPGPECCSALGSVSR----------DCACGA----------IDIINSLPAKCGLPRVSCQ
2ALG Chain:A ((2-77))
----ITCGQVSSSLAPCIPYVRGG--G----AVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVS-----
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19282 for 338 contacts (-57.0/contact) +
2D Compatibility (PS) -5839 + (NN) -4774 + (LL) 792
1D Compatibility (HY) -3200 + (ID) 1100
Total energy: -33403.0 ( -98.83 by residue)
QMean score : 0.270
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: