Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------------------------------------------------APRGAHGAGECGKTPADKMALKLAPCA-SAGQDPKSAPSSGCCAAVHTIGKQSPKCLCAVMLSDTAKSAGI----KPEAAMSIPKRCNLVDRPVGYKCGAYT-LP---------- |
| 3P06 Chain:A ((1-194)) | NGVELSAVGVLLPVLMDSGRRISGGAFMAVKGDLSEHIKNPKNTRIAQTVAGGTIYGLSEMVNIDEAEKLPIKGAITVLPVVQATATSILVPDNQPQLAFNSWEAAACAADTLESQQTPFLMVTG-------------AVES-GNLSPNLLAVQKQLLVAKPAGIGLAANSDRALKVVT-LEQLRQVVGDKPWRKPMVTFSSGKNVAQA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3P06.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4187 for 511 contacts (-8.2/contact) +
2D Compatibility (PS) -8433 + (NN) 482 + (LL) 276
1D Compatibility (HY) -400 + (ID) 1100
Total energy: -13362.0 ( -26.15 by residue)
QMean score : 0.151
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