Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGPAAGGAAVADPAGCQDDVVALNEACYKYVQKGAPTVPPSQECCDAVKSVDVP----------CVCSYLGSPGVRDNISMEKVFYVSQQCGVSIP--------GNCGGSKV
1BWO Chain:A ((1-90))
-------------IDC-GHVDSLVRPCLSYVQGGP---GPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLN-EDNARSIPPKCG--VNLPYTISLNIDCSRV--
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24495 for 463 contacts (-52.9/contact) +
2D Compatibility (PS) -7563 + (NN) -3187 + (LL) 800
1D Compatibility (HY) -3200 + (ID) 1050
Total energy: -38695.0 ( -83.57 by residue)
QMean score : 0.300
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: