Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
HPCGRTFLSAL------------IQLVPCRPSVAPFSTLPPNGLCCAAIKTLG---------QPCLCVLAKGPPIVGVD-------RTLALHLPGKCSANFLPCN----
2SIC Chain:I ((1-107))
YAPSALVLTVGKGVSATTAAPERAVTLTCAPG--PSGTHPAAGSACADLAAVGGDLNALTRGEDVMCPMVYDPVLLTVDGVWQGKRVSYERVFSNECEMNAHGSSVFAF
General information:
TITO was launched using:
RESULT:
Template:
2SIC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32865 for 456 contacts (-72.1/contact) +
2D Compatibility (PS) -8039 + (NN) -2121 + (LL) 336
1D Compatibility (HY) -1600 + (ID) 800
Total energy: -45089.0 ( -98.88 by residue)
QMean score : 0.166
(partial model without unconserved sides chains):
PDB file :
Tito_2SIC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2SIC-query.scw
PDB file :
Tito_Scwrl_2SIC.pdb
: