Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ALSC----GTVSGNLAACIGYLTQ--------NGPLPRGCCTGVTN---------LNNMARTTPDRQQACRCLVGAANAFPTLNAARAAGL------PKACGVNIPYKIS--KSTNCNSVR-----
1HSS Chain:A ((5-124))
--MCYPGQAFQVPALPACRPLLRLQCNGSQVP-EAVLRDCCQQLAHISEWCRCGALYSMLDS--MYKEH--------GAFPRCRREVVKLTAASITA--VCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29053 for 426 contacts (-68.2/contact) +
2D Compatibility (PS) -8076 + (NN) 343 + (LL) 772
1D Compatibility (HY) -6000 + (ID) 900
Total energy: -42914.0 ( -100.74 by residue)
QMean score : 0.264
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: