Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------APGCDTVDTDLAPCISYLQTGT------------GNPTVQCCSGVKTLAGTAQ-----------TTEDRKAICECIKTAAIRVKPVA----------NAVKSLPGLCSVTLPFPISIATDCNKIV
3T6G Chain:B ((96-229))
SDRQLLLFYLEQCEANLTTLTNAVDAFFTAVATNQPPKIFVAHSKFVILSAHKLVFIGDTLSRQAKAADVRSQVTHYSNLLCDLLRGIVATTKAAALQYPSPSAAQDMVERVKELGHSTQQFRRVLGQLAAALE
General information:
TITO was launched using:
RESULT:
Template:
3T6G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43516 for 630 contacts (-69.1/contact) +
2D Compatibility (PS) -8506 + (NN) 7485 + (LL) 0
1D Compatibility (HY) -1200 + (ID) 650
Total energy: -46387.0 ( -73.63 by residue)
QMean score : 0.276
(partial model without unconserved sides chains):
PDB file :
Tito_3T6G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3T6G-query.scw
PDB file :
Tito_Scwrl_3T6G.pdb
: