Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----ISCTEAVAAMNPCLPFLIGAQASPVAPCCLAVQNV---NQEASTKEIRRELCDCFKKAGPALGVKPDKAKQLPDLCHVQVPVPIDPTIDCSKVTEDIAW--
2DIR Chain:A ((1-98))
GSSGSSGKAFLEDMKKYAETFLEPWFKAPNKGTFQIVYKSRNNSHVNREEVIRELAGIVCTLNSENKVDLTNPQ-------YTVVVEIIKAVCCLSVVKSGPSSG
General information:
TITO was launched using:
RESULT:
Template:
2DIR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37977 for 581 contacts (-65.4/contact) +
2D Compatibility (PS) -9812 + (NN) -3491 + (LL) 356
1D Compatibility (HY) -2800 + (ID) 650
Total energy: -54374.0 ( -93.59 by residue)
QMean score : 0.391
(partial model without unconserved sides chains):
PDB file :
Tito_2DIR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DIR-query.scw
PDB file :
Tito_Scwrl_2DIR.pdb
: