Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ITC--GQVVSG--LSSCLSYLRS--------GGAVPPACCNGVRGLN-----SAAKTTADRQQVCECLK------SAAAGINLSNASSLPGKCNVNIPYKIS--PSTDCKSIK-----
1HSS Chain:A ((5-124))
-MCYPGQAFQVPALPACRPLLRLQCNGSQVP-EAVLRDCCQQLAHISEWCRCGALYSMLDS--MYKEH-GAFPRCRREVVKLTAASITA--VCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33426 for 507 contacts (-65.9/contact) +
2D Compatibility (PS) -8262 + (NN) -186 + (LL) 24
1D Compatibility (HY) -4400 + (ID) 900
Total energy: -47150.0 ( -93.00 by residue)
QMean score : 0.271
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: