Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------AITCGQVASA---LSPCISYLQK-------------GGAVPPACCSGIKSLNSSAKTTADRQAACKCLKNFSSTVSGINLSLASGLPGKCGVSVPYKISPSTDCTKVT
1S6D Chain:A ((1-103))
PYGRGRTESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMML---NEPMWIRMRDQVMSMAHNLPIECNLM-------SQPCQM--
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24153 for 553 contacts (-43.7/contact) +
2D Compatibility (PS) -7744 + (NN) 2862 + (LL) 664
1D Compatibility (HY) -4400 + (ID) 950
Total energy: -33721.0 ( -60.98 by residue)
QMean score : 0.200
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: