Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---AIDCS--TVTALVSACSTFITYGAPDPIPGSPCCDAVVGLNSIADSIDNRRSV----CRCLMGLIATYNPNATAIATLPGFCGISLGFNLDPNTDCNLVDGAASNE
1V74 Chain:A ((1-107))
LNDPLDSGRFSRKQLDKKYKHAGDFGISDTKKNRETLTKF--RDAIEEHLSDKDTVEKGTYRREKGSKVYFNPNTMNVVIIKSNGEFLSGWKINPDADNGRIYLETGEL
General information:
TITO was launched using:
RESULT:
Template:
1V74.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39771 for 634 contacts (-62.7/contact) +
2D Compatibility (PS) -10175 + (NN) -3027 + (LL) 20
1D Compatibility (HY) 400 + (ID) 700
Total energy: -53253.0 ( -84.00 by residue)
QMean score : 0.339
(partial model without unconserved sides chains):
PDB file :
Tito_1V74.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1V74-query.scw
PDB file :
Tito_Scwrl_1V74.pdb
: