Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------------AISCGQVASA--IAPCISYARGQGSGPS-----------------AGCCSGVKSLNNAARTTADRRAACNCLKNA---AAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN |
1W2Q Chain:A ((1-127)) | GPMRRERGRQGDSSSCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAPQRCDLDVSGGRCS |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1W2Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -22935 for 597 contacts (-38.4/contact) +
2D Compatibility (PS) -9479 + (NN) 33 + (LL) 0
1D Compatibility (HY) -1600 + (ID) 650
Total energy: -34631.0 ( -58.01 by residue)
QMean score : 0.151
|
|
|