Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
APCNPVELSPCLAAISGSQPPSAECCSKLKE-----------QVPCFCDYVKNPVFKPY--VDSPNAKKVAATCGVAFPTC
2ALG Chain:A ((10-79))
------SLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQLS-ASVPGVNPNNAAALPGKCGVSIP--
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19217 for 336 contacts (-57.2/contact) +
2D Compatibility (PS) -5725 + (NN) -1819 + (LL) 288
1D Compatibility (HY) -5200 + (ID) 850
Total energy: -32523.0 ( -96.79 by residue)
QMean score : 0.262
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: