Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ASSCNPS--ALSACAPALFGRAVTLGCCASLRA-----------QQPCLCQYKRDPANRAY--VNGPAAQRFTRACGLTQMKC
1T12 Chain:A ((1-78))
AITCGQVTSNLAPCLAYLRNTGPLGRCCGGVKALVNSARTTEDRQIACTC--LKSAA-GAISGINLGKAAGLPSTCGVNIP--
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28899 for 394 contacts (-73.3/contact) +
2D Compatibility (PS) -6284 + (NN) 3581 + (LL) 252
1D Compatibility (HY) -3600 + (ID) 850
Total energy: -35800.0 ( -90.86 by residue)
QMean score : 0.341
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: