Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VTCGQVV---SMLAPCIMYATGRVSAPTGGCCDGVRTLNSAAATTADRQTTCACLKQQTSAMGG-----------------------LRPDLVAGIPSKCDVNIPYAISPSTDCSRVH---------
3ZCO Chain:A ((12-138))
ETISKKIIGMSLLMRTFLYTLAQETEGTNRHTLALETVLIKMVKMLRDNPGYKASKEIKKVICGAWEPAITIEKLKQFSWISVVNDLVGEKLVVVVLEEPSASIMVELKLPLEINYAFSMDEEFKNM
General information:
TITO was launched using:
RESULT:
Template:
3ZCO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42933 for 571 contacts (-75.2/contact) +
2D Compatibility (PS) -9877 + (NN) -2989 + (LL) 0
1D Compatibility (HY) -3200 + (ID) 550
Total energy: -59549.0 ( -104.29 by residue)
QMean score : 0.311
(partial model without unconserved sides chains):
PDB file :
Tito_3ZCO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZCO-query.scw
PDB file :
Tito_Scwrl_3ZCO.pdb
: