Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQCSAAQLAACAPAIISGSPPTASCCSNLRA-----------QEPCFCQYARNPAYSSY--INSPNARRTLASCGIAVPSC
2ALG Chain:A ((10-79))
------SLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQLS-ASVPGVNPNNAAALPGKCGVSIP--
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22535 for 336 contacts (-67.1/contact) +
2D Compatibility (PS) -5714 + (NN) 1039 + (LL) 888
1D Compatibility (HY) -4000 + (ID) 900
Total energy: -31222.0 ( -92.92 by residue)
QMean score : 0.236
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: